post https://cavatica-api.sbgenomics.com/v2
/tasks/{task_id}/actions/clone
For general information on the API, including formatting, parameters, and pagination, please see the API Overview.
This call reruns the specified task. Once rerun, the task can either be in draft mode or immediately ran, using the action query parameter (see below).
Request
https://cavatica-api.sbgenomics.com/v2/tasks/{task_id}/actions/clone
POST /v2/tasks/bd5e95d9-12b3-789c-45b6-34d8696571a9/actions/clone" HTTP/1.1
Host: cavatica-api.sbgenomics.com
X-SBG-Auth-Token: 3259c50e1ac5426ea8f1273259740f74
curl -s -H "X-SBG-Auth-Token: 6282d5e2121d43e7900e9d52b15845e7" -H "content-type: application/json" -X POST "https://cgc-api.sbgenomics.com/v2/tasks/bd5e95d9-12b3-789c-45b6-34d8696571a9/actions/run"
Header Fields
| Name | Description |
|---|---|
X-SBG-Auth-Tokenrequired | Your CAVATICA authentication token. |
Path parameters
| Name | Description |
|---|---|
task_id | The ID of the task you are rerunning on. |
Query parameters
| Name | Data type | Description |
|---|---|---|
action | string | Set this to run in order to create a draft task and execute it immediately. |
Response
See a list of CAVATICA-specific response codes that may be contained in the body of the response.
{
"href": "https://cavatica-api.sbgenomics.com/v2/tasks/bd5e95d9-12b3-789c-45b6-34d8696571a9",
"id": "bd5e95d9-12b3-789c-45b6-34d8696571a9",
"name": "VarsScan2 WF from BAM test",
"status": "DRAFT",
"project": "rfranklin/rfranklin-s-demo-project",
"app": "rfranklin/rfranklin-s-demo-project/varscan2-workflow-from-bam-v2-3-9/0",
"type": "v2",
"created_by": "rfranklin",
"start_time": "2018-07-03T14:24:10Z",
"batch": false,
"use_interruptible_instances": false,
"errors": [],
"warnings": [],
"inputs": {
"input_fasta_file": {
"path": "567890abc9b0307bc0414164",
"class": "File"
},
"Normal_BAM": {
"path": "567890abc1e5339df0414123",
"class": "File"
},
"Tumor_BAM": {
"path": "567890abc4f3066bc3750174",
"class": "File"
}
},
"outputs": {
"High_Confidence_INDELs": {},
"empty_contigs": {},
"High_Confidence_SNPs": {}
},
"created_time": "2018-07-03T14:24:10Z"
}
